Quang Nguyen
@denvercal1234GitHubComputational immunologist learnin 2do the right 🎨 w good people. Duke BS/LIVE MSc/Oxford DPhil~Havard/Gates/Greenhouse/Clarendon
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Top Repositories
Learn to code in R from just your laptop and wifi with QNNDukeNguyen
This repository is an exploratory resource to accelerate opensource analysis of CosMx® Spatial Molecular Imager (SMI) data. Contained here are and writeups and vignettes addressing a variety of topics discussed when analyzing single-cell spatial data.
Practical utilities for scRNAseq from the Sage lab
To generate numerical tables summarising the clonal expansion and clonal sharing between clusters from Seurat Object with appended TCR info, e.g., output from scRepertoire
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
Minimal book to explore scACTseq and RNAseq
Calculating customized gene percent expression for certain organisms
A small python resource, to teach classes some key terminology for databases and to practice implementing key database features
A toolkit for single-cell immune profiling
A computational toolkit in R for the integration, exploration, and analysis of high-dimensional single-cell cytometry and imaging data.
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